What's in a name? That which we call a rose by any other name would smell as sweet.
1. ARID domain nomenclature
ARID A/T rich interaction domain
Solution Structure Of The Swi1 Arid.
S.Kim, Z.Zhang, S.Upchurch, N.Isern & Y.Chen, 22-Dec-03
Hs SWI1 (SMARCF1) ARID 1RYU
Solution Structure Of Arid Domain Of Adr6 From Saccharomyces Cerevisiae.
X.Tu, J.Wu, Y.Xu & Y.Shi, 18-Dec-01
1KN5
Solution Structure Of The Dna-Binding Domain Of Adr6.
X.Tu, J.Wu, Y.Xu & Y.Shi, 10-Dec-01
1KKX
Solution Structure Of The Dna-Binding Domain From The Dead Ringer Protein.
J.Iwahara & R.T.Clubb, 22-Jul-99
1C20
Solution Structure Of The Dead Ringer Arid-Dna Complex.
J.Iwahara, M.Iwahara, G.W.Daughdrill, J.Ford & R.T.Clubb, 7-Jan-02
1KQQ
Human Mrf-2 Domain, Nmr, 11 Structures.
D.Lin, V.Tsui, D.Case, Y.C.Yuan & Y.Chen, 17-Apr-01
1IG6
Crystal Structure Of A Ternary Complex Of The Human Histone Methyltransferase Set79.
B.Xiao, C.Jing, J.R.Wilson, P.A.Walker, N.Vasisht, G.Kelly, S.Howell, I.A.Taylor, G.M.Blackburn & S.J.Gamblin, 18-Dec-02
1O9S
Structural Basis For The Product Specificity Of Histone Lysine Methyltransferases.
X.Zhang, Z.Yang, S.I.Khan, J.R.Horton, H.Tamaru, E.U.Selker & X.Cheng, 21-May-03
1PEG
ARID alignment
2. ARID containing protein evolution underpins the nomenclature
3. What is a conserved domain?
4. Future work
1. ARID domain nomenclature
The ARID domain
arid3 family , clustalw , fasta
smyd family , clustalw
Gottlieb, et al. 2002, Nature Genetics.
future work
ARID overview
ARID3 family evolution
ARID5 family evolution
ARID domain evolution
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